Spatial multi-omic map of human myocardial infarction
Christoph Kuppe*, Ricardo O. Ramirez Flores*, Zhijian Li*, Sikander Hayat, Rebecca Levinson, Xian Liao, Monica Hannani, Jovan Tanevski, Florian Wünnemann, James Nagai, Maurice Halder, David Schumacher, Sylvia Menzel, Gideon Schäfer, Konrad Hoeft, Mingbo Cheng, Susanne Ziegler, Xiaoting Zhang, Fabian Peisker,Turgay Saritas, Nadine Kaesler, Yaoxian Xu, Astrid Kassner, Jan Gummert, Michkiel Morshuis, Junedh Amrute, Rogier Veltrop, Peter Boor, Karin Klingel, Linda W. Van Laake, Aryan Vink, Remco M. Hoogenboezem, Eric M.J. Bindels, Leon Schurgers, Susanne Sattler, Denis Schapiro, Rebekka K. Schneider, Kory Lavine, Hendrik Milting*, Ivan G. Costa*, Julio Saez-Rodriguez*, Rafael Kramann*
Chromatin-accessibility estimation from single-cell ATAC-seq data with scOpen
Zhijian Li*, Christoph Kuppe*, Susanne Ziegler, Mingbo Cheng, Nazanin Kabgani, Sylvia Menzel, Martin Zenke, Rafael Kramann*, Ivan G Costa*
Causal integration of multi-omics data with prior knowledge to generate mechanistic hypotheses
Christoph Kuppe*, Mahmoud M. Ibrahim*, Jennifer Kranz, Xiaoting Zhang, Susanne Ziegler, Javier Perales-Patón, Jitske Jansen, Katharina C. Reimer, James R. Smith, Ross Dobie, John R. Wilson-Kanamori, Maurice Halder, Yaoxian Xu, Nazanin Kabgani, Nadine Kaesler, Martin Klaus, Lukas Gernhold, Victor G. Puelles, Tobias B. Huber, Peter Boor, Sylvia Menzel, Remco M. Hoogenboezem, Eric M. J. Bindels, Joachim Steffens, Jürgen Floege, Rebekka K. Schneider, Julio Saez-Rodriguez, Neil C. Henderson* & Rafael Kramann*
Decoding myofibroblast origins in human kidney fibrosis
Ferenc Tajti*, Christoph Kuppe*, Asier Antoranz, Mahmoud M Ibrahim, Hyojin Kim, Francesco Ceccarelli, Christian H Holland, Hannes Olauson, Jürgen Floege, Leonidas G Alexopoulos, Rafael Kramann, Julio Saez-Rodriguez